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Misc51k · #1848

clinical-decision-support

Prepares and validates documents for clinical research, such as evidence profiles and cohorts. It focuses on research documentation, not patient care.

What it does

This tool helps organize and check research documents about clinical decision-making. It creates reports for studies, not for real patient use.

When to use it

  • ✓When planning a study on how to help doctors make decisions.
  • ✓When documenting the quality of evidence for clinical research.
  • ✓When creating tables with aggregated data for analysis, without using real patient information.

Example of what to ask your AI

“Generate a report template for evaluating the performance of a clinical decision model in research.”

Want more? Open the sections below.

How to use

The easiest way: copy the message below and paste it into Claude, ChatGPT, Cursor or any AI. It reads the skill and follows the instructions.

Skill link

https://github.com/K-Dense-AI/scientific-agent-skills/blob/main/skills/clinical-decision-support/SKILL.md

Ready-to-paste message

Use this skill to help me: https://github.com/K-Dense-AI/scientific-agent-skills/blob/main/skills/clinical-decision-support/SKILL.md Read the SKILL.md file at that link and follow its instructions for my task.
How it works

The tool uses predefined templates and scripts to generate documents. It ensures all necessary research information is included and correctly formatted, but it does not analyze patient data.

Installation

Easiest way: copy the skill link and paste it into Claude, ChatGPT or Cursor asking it to follow the instructions.

In the terminal (Claude Code, Codex, Cursor), in your project folder:

npx skills add K-Dense-AI/scientific-agent-skills --skill clinical-decision-support

Or download just the file:

curl -L https://raw.githubusercontent.com/K-Dense-AI/scientific-agent-skills/main/skills/clinical-decision-support/SKILL.md -o SKILL.md
Technical content (original SKILL.md)

Original text by the author, straight from GitHub.

Clinical Decision-Support Research and Evaluation

Hard Safety Boundary

This skill produces research, evaluation, documentation, and governance artifacts only.

Never use it to:

  • diagnose or classify a person;
  • recommend, select, sequence, start, stop, or modify treatment;
  • calculate or communicate a patient-specific dose;
  • triage, prioritize, alarm, alert, or determine urgency;
  • make or automate a patient-specific clinical decision;
  • support bedside, point-of-care, or live clinical operation;
  • replace professional judgment or a validated, authorized clinical system;
  • claim FDA authorization, regulatory conformity, HIPAA compliance, or legal compliance.

If a request could affect care for a person, stop the workflow and route the matter to a licensed healthcare professional using locally validated and appropriately authorized systems. Do not redirect to another skill for patient-specific care.

In Scope

  • Intended-use and limitation statements for research artifacts
  • Aggregate cohort table shells with disclosure controls
  • Statistical analysis plans and survival-analysis plan review
  • Aggregate model or biomarker performance evaluation
  • Transparent GRADE evidence-profile checklists
  • Evidence-source and decision-logic traceability
  • De-identification process checklists
  • Fairness, subgroup, calibration, uncertainty, external-validation, monitoring, change-control, audit, and human-factors documentation

Outputs remain drafts until qualified humans approve them. Reporting guidance improves transparency; it does not establish study quality, clinical utility, safety, effectiveness, authorization, or compliance.

Data Gate

Before any script:

  1. Have the responsible human reviewer confirm and document that input is synthetic or aggregate. Scripts cannot establish this from field names or declared metadata.
  2. Reject patient rows, records, narratives, identifiers, free text, dates tied to people, images, waveforms, or genomic sequences.
  3. Keep source files local. Do not fetch URLs, call APIs, read environment variables, or send data to a model.
  4. Set disclosure thresholds before producing tables.
  5. Record provenance, data cut date, population, exclusions, missingness, and transformations.

The scripts cap file size, groups, rows, and text length. They reject URL-like paths and common row-level keys. These controls reduce accidental misuse; they are not a privacy determination.

Required Artifact Header

Every artifact must visibly include:

  • artifact_type, title, version, status, owner, date, and change summary;
  • intended purpose, intended users, aggregate population scope, and decision role;
  • all prohibited uses from the hard boundary;
  • data level and confirmation that no PHI or raw rows were supplied;
  • limitations, uncertainty, and foreseeable failure modes;
  • external-validation and subgroup applicability status;
  • human-review roles, completion status, and approval boundary;
  • source citations with versions or dates;
  • monitoring, change-control, retirement, and audit expectations;
  • the statement: Not for patient care or live clinical use.

Start from assets/artifact_intended_use_template.json.

Workflow

1. Frame the Research Question

  • Define the estimand or evaluation target before viewing results.
  • Distinguish descriptive, prognostic, predictive, diagnostic-accuracy, and causal questions.
  • Pre-specify outcomes, time origin, horizon, subgroups, cut points, missing-data handling, multiplicity, and sensitivity analyses.
  • Separate exploratory findings from confirmatory analyses.

2. Select the Artifact

Need Asset Script
Intended-use/governance review assets/artifact_intended_use_template.json scripts/validate_cds_artifact.py
GRADE evidence profile assets/evidence_profile_template.json scripts/evidence_profile_check.py
Aggregate model/biomarker evaluation assets/aggregate_model_evaluation_template.json scripts/model_biomarker_evaluation.py
Aggregate cohort table assets/aggregate_cohort_table_template.json scripts/cohort_table_generator.py
Survival analysis plan assets/survival_analysis_plan_template.json scripts/survival_plan_validator.py
Logic traceability matrix assets/decision_logic_traceability_template.json scripts/decision_logic_traceability.py

…

FAQ

Can I use this to help a patient right now?

No, this tool is strictly for research and documentation. It cannot be used for diagnosis, treatment, or any decision affecting a patient in real-time.

Does it analyze patient data?

No, it only works with data that has been anonymized or is aggregate in nature (summaries). It rejects information that could identify a patient.

What are 'artifacts'?

Artifacts are the documents and reports the tool creates to organize and validate research information, such as analysis plans or evidence profiles.

Details

Original description by the author

Prepares and validates research-only clinical decision-support evaluation, evidence-profile, cohort, survival, biomarker/model, privacy, and governance artifacts. Supports aggregate or synthetic research documentation and traceability, excluding patient care and live clinical operation.

repo: K-Dense-AI/scientific-agent-skills

Popularity

GitHub stars
51k
Ranking position
#1848
License
MIT
Updated
10/15/2026

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